CDS

Accession Number TCMCG017C22906
gbkey CDS
Protein Id OMO77242.1
Location join(56051..56778,57280..57349)
GeneID InterPro:IPR006676
Organism Corchorus olitorius
locus_tag COLO4_25255

Protein

Length 265aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018979.1
Definition tRNA-splicing endonuclease [Corchorus olitorius]
Locus_tag COLO4_25255

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA-splicing endonuclease subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K15322        [VIEW IN KEGG]
EC 3.1.27.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000213        [VIEW IN EMBL-EBI]
GO:0000214        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000379        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0004549        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006388        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010069        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016892        [VIEW IN EMBL-EBI]
GO:0016894        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902555        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1905348        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGCCTAGATGGAAAGGAAAAGGCTCAGAAGCCAAAGCTATTGCAGACCCTATGTCAAAAATAGTCTCACAGCTTCAGTCTTCTTTGATGCAATCTGAGGCCCATGGTTTACTCTCAAGCTGCAGTGTACTTGTTGAAGTGGATGCAGAAGTGGCTGATCTTCTCAACCGTGCGTGTTTTGGGCGACCACGAATCACAGCTGAGAAGGAACAACAGTGGTTTCAGTTGGATATGGAAGAAGCCTTTTATTTGTGTTTTTCACTCAAATGCCTCAAGGTTGTCAGTAAAGATGGTTGTACAAAGAGTGATGAAGAGCTGTGGGAGTACATGAAATCCAAAAAGGAAGTTTTCCCTATCTCTTACAAGGCTTATTCTCATCTTCGAAATAAAAATTGGGTTGTGAGATCAGGATTGCAGTATGGGGTGGACTTTGTTGCCTACCATCATCATCCGGCCCTTGTCCATTCTGAGTATGCAGTGCTGGCGCTATCAGAAGGAGAAAATGATCTAAATGGTCGGCTGAGAGTGTGGTCAGATGTTCACTGTACAGTTCGGCTTTGTGGAAGTGTTGCAAAAACATTGTTGATTCTTAACGTAAATAATGACGGTCAGGGTGCTATCTCTCCATCGTGTTTAGAGCACTACACTGTTGAAGAGAGGACAATCACAAGATGGAATCCTGAACAATCCCGTGAGAACCAAGGAGTTCTTGAGAATCAAACGAATAGATCTGAATCTGATCTTCTCTTACTCACTTGTGTCTCTGTTGTTGAAATTAGGAAAATGCGAAGTTAA
Protein:  
MKPRWKGKGSEAKAIADPMSKIVSQLQSSLMQSEAHGLLSSCSVLVEVDAEVADLLNRACFGRPRITAEKEQQWFQLDMEEAFYLCFSLKCLKVVSKDGCTKSDEELWEYMKSKKEVFPISYKAYSHLRNKNWVVRSGLQYGVDFVAYHHHPALVHSEYAVLALSEGENDLNGRLRVWSDVHCTVRLCGSVAKTLLILNVNNDGQGAISPSCLEHYTVEERTITRWNPEQSRENQGVLENQTNRSESDLLLLTCVSVVEIRKMRS